Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Inference of natural selection from ancient DNA
Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
Show others and affiliations
2020 (English)In: EVOLUTION LETTERS, Vol. 4, no 2, p. 94-108Article in journal (Refereed) Published
Abstract [en]

Evolutionary processes, including selection, can be indirectly inferred based on patterns of genomic variation among contemporary populations or species. However, this often requires unrealistic assumptions of ancestral demography and selective regimes. Sequencing ancient DNA from temporally spaced samples can inform about past selection processes, as time series data allow direct quantification of population parameters collected before, during, and after genetic changes driven by selection. In this Comment and Opinion, we advocate for the inclusion of temporal sampling and the generation of paleogenomic datasets in evolutionary biology, and highlight some of the recent advances that have yet to be broadly applied by evolutionary biologists. In doing so, we consider the expected signatures of balancing, purifying, and positive selection in time series data, and detail how this can advance our understanding of the chronology and tempo of genomic change driven by selection. However, we also recognize the limitations of such data, which can suffer from postmortem damage, fragmentation, low coverage, and typically low sample size. We therefore highlight the many assumptions and considerations associated with analyzing paleogenomic data and the assumptions associated with analytical methods.

Place, publisher, year, edition, pages
2020. Vol. 4, no 2, p. 94-108
National Category
Evolutionary Biology
Research subject
Diversity of life
Identifiers
URN: urn:nbn:se:nrm:diva-4097DOI: 10.1002/evl3.165OAI: oai:DiVA.org:nrm-4097DiVA, id: diva2:1511390
Funder
Swedish Research Council, 2017-04647Available from: 2020-12-18 Created: 2020-12-18 Last updated: 2020-12-18

Open Access in DiVA

fulltext(767 kB)107 downloads
File information
File name FULLTEXT01.pdfFile size 767 kBChecksum SHA-512
d3cd523def308cc33fb73f754ae0599778cdef401647945d53d0b125a961e5256878c999e9325a57df033882b901ac94f621978df754d773f2d8b881face1bde
Type fulltextMimetype application/pdf

Other links

Publisher's full text

Search in DiVA

By author/editor
Dehasque, MarianneDiez-del-Molino, DavidDalen, Love
By organisation
Department of Bioinformatics and Genetics
Evolutionary Biology

Search outside of DiVA

GoogleGoogle Scholar
Total: 107 downloads
The number of downloads is the sum of all downloads of full texts. It may include eg previous versions that are now no longer available

doi
urn-nbn

Altmetric score

doi
urn-nbn
Total: 167 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf