We conducted a detailed field and laboratory study of internal segregation structures of two hand-size pillow lavas samples. They were dredged, respectively, on the Josephine seamount, Tore-Madeira Rise (TMR), and on a small quaternary volcanic edifice located on the continental edge of the trench close to the Chile Triple Junction (CTJ). Both pillows display a combination of four types of segregation structures (spherical vesicles, pipe vesicles, vesicle cylinders, and vesicle sheets) observed so far only within subaerial basalt flows typically 2–10 m thick. In particular, the samples offer a remarkable exposure of the transition between pipe vesicles and cylinders. We show that the vesicle sheets are not generated by the same mechanism in both occurrences; they do not seem to be connected to cylinders in the CTJ pillow as they are in the TMR pillow. The two pillows are geochemically distinct, the TMR being alkaline and the CTJ calc–alkaline. Two types of internal differentiation are proposed. The first one implies the extraction of the residual liquid from the host lava and transport towards the segregation structures, whereas the other one results from in situ crystallization within one given structure. In the latter case, glass composition is highly dependant on the nature of the neighbouring crystallizing minerals. The degree of crystallization required to produce a crystal framework strong enough for generating the segregation structures seems to be lower in pillows (ca. 25% crystallization) than in vapor-differentiated basaltic lava flows (35% crystallization).