Change search
Refine search result
1 - 10 of 10
CiteExportLink to result list
Permanent link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Rows per page
  • 5
  • 10
  • 20
  • 50
  • 100
  • 250
Sort
  • Standard (Relevance)
  • Author A-Ö
  • Author Ö-A
  • Title A-Ö
  • Title Ö-A
  • Publication type A-Ö
  • Publication type Ö-A
  • Issued (Oldest first)
  • Issued (Newest first)
  • Created (Oldest first)
  • Created (Newest first)
  • Last updated (Oldest first)
  • Last updated (Newest first)
  • Disputation date (earliest first)
  • Disputation date (latest first)
  • Standard (Relevance)
  • Author A-Ö
  • Author Ö-A
  • Title A-Ö
  • Title Ö-A
  • Publication type A-Ö
  • Publication type Ö-A
  • Issued (Oldest first)
  • Issued (Newest first)
  • Created (Oldest first)
  • Created (Newest first)
  • Last updated (Oldest first)
  • Last updated (Newest first)
  • Disputation date (earliest first)
  • Disputation date (latest first)
Select
The maximal number of hits you can export is 250. When you want to export more records please use the Create feeds function.
  • 1. Ariyawansa, H.A
    et al.
    Hyde, K.D.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Westberg, Martin
    Swedish Museum of Natural History, Department of Botany.
    Erratum to: Fungal Diversity Notes 111–252 - taxonomic and phylogenetic contributions to fungal taxa.2015In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 75, p. 275-277Article in journal (Refereed)
  • 2. Ariyawansa, H.A.
    et al.
    Hyde, K.D.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Westberg, Martin
    Swedish Museum of Natural History, Department of Botany.
    Fungal Diversity Notes 111–252 - taxonomic and phylogenetic contributions to fungal taxa2015In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 75, p. 27-274Article in journal (Refereed)
  • 3.
    Nilsson, R Henrik
    et al.
    GU.
    Hyde, Kevin D.
    Pawlowska, Julia
    Ryberg, Martin
    Tedersoo, Leho
    Aas, Anders Bjornsgard
    Alias, Siti A.
    Alves, Artur
    Anderson, Cajsa Lisa
    Antonelli, Alexandre
    Arnold, A. Elizabeth
    Bahnmann, Barbara
    Bahram, Mohammad
    Bengtsson-Palme, Johan
    Berlin, Anna
    Branco, Sara
    Chomnunti, Putarak
    Dissanayake, Asha
    Drenkhan, Rein
    Friberg, Hanna
    Froslev, Tobias Guldberg
    Halwachs, Bettina
    Hartmann, Martin
    Henricot, Beatrice
    Jayawardena, Ruvishika
    Jumpponen, Ari
    Kauserud, Havard
    Koskela, Sonja
    Kulik, Tomasz
    Liimatainen, Kare
    Lindahl, Bjorn D.
    Lindner, Daniel
    Liu, Jian-Kui
    Maharachchikumbura, Sajeewa
    Manamgoda, Dimuthu
    Martinsson, Svante
    Neves, Maria Alice
    Niskanen, Tuula
    Nylinder, Nylinder
    Swedish Museum of Natural History, Department of Botany.
    Pereira, Olinto Liparini
    Pinho, Danilo Batista
    Porter, Teresita M.
    Queloz, Valentin
    Riit, Taavi
    Sanchez-Garcia, Marisol
    de Sousa, Filipe
    Stefanczyk, Emil
    Tadych, Mariusz
    Takamatsu, Susumu
    Tian, Qing
    Udayanga, Dhanushka
    Unterseher, Martin
    Wang, Zheng
    Wikee, Saowanee
    Yan, Jiye
    Larsson, Ellen
    Larsson, Karl-Henrik
    Koljalg, Urmas
    Abarenkov, Kessy
    Improving ITS sequence data for identification of plant pathogenic fungi2014In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 67, no 1, p. 11-19Article in journal (Refereed)
    Abstract [en]

    Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours. These taxa often have complex and poorly understood life cycles, lack observable, discriminatory morphological characters, and may not be amenable to in vitro culturing. As a result, species identification is frequently difficult. Molecular (DNA sequence) data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi, with the nuclear ribosomal internal transcribed spacer (ITS) region being the most popular marker. However, international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality, making their use in the molecular identification of plant pathogenic fungi problematic. Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages. A third objective was to enrich the sequences with geographical and ecological metadata. The results - a total of 31,954 changes - are incorporated in and made available through the UNITE database for molecular identification of fungi (including standalone FASTA files of sequence data for local BLAST searches, use in the next-generation sequencing analysis platforms QIIME and mothur, and related applications. The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi, and we invite all researchers with pertinent expertise to join the annotation effort.

  • 4. Otálora, Monica A.G.
    et al.
    Jørgensen, Per M.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    A revised generic classification of the jelly lichens, Collemataceae.2014In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 64:, p. 275-293Article in journal (Refereed)
  • 5. Pizarro, D.
    et al.
    Divakar, Pradeep K.
    Grewe, F.
    Leavitt, S.D.
    Huang, J.P.
    Dal Grande, F.
    Schmitt, Imke
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Crespo, Ana
    Lumbsch, H. Thorsten
    Phylogenomic analysis of 2256 single-copy protein-coding genes resolves most evolutionary relationships for the major clades in the most diverse clade of lichen-forming fungi2018In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 92, p. 31-41Article in journal (Refereed)
  • 6.
    Prieto, Maria
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Schultz, Matthias
    Olariaga, Ibai
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Lichinodium is a new lichenized lineage in the Leotiomycetes2019In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 94, p. 23-39Article in journal (Refereed)
  • 7.
    Prieto, Maria
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Phylogeny, taxonomy and diversification events in the Caliciaceae.2017In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 82, p. 221-238Article in journal (Refereed)
  • 8.
    Resl, Philipp
    et al.
    University of Graz.
    Schneider, Kevin
    University of Graz.
    Westberg, Martin
    Swedish Museum of Natural History, Department of Botany.
    Printzen, Christian
    Senckenberg Forschungsinstitut und Naturmuseum.
    Palice, Zdenek
    Academy of Sciences of the Czech Republic.
    Thor, Göran
    Department of Ecology, Swedish University of Agricultural Sciences.
    Fryday, Alan
    Michigan State University.
    Mayrhofer, Helmut
    University of Graz.
    Spribille, Toby
    University of Graz & University of Montana.
    Diagnostics for a troubled backbone: testing topologicalhypotheses of trapelioid lichenized fungi in a large-scalephylogeny of Ostropomycetidae (Lecanoromycetes)2015In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 73, p. 239-275Article in journal (Refereed)
    Abstract [en]

    Trapelioid fungi constitute a widespread groupof mostly crust-forming lichen mycobionts that are key tounderstanding the early evolutionary splits in theOstropomycetidae, the second-most species-rich subclassof lichenized Ascomycota. The uncertain phylogeneticresolution of the approximately 170 species referred tothis group contributes to a poorly resolved backbone forthe entire subclass. Based on a data set including 657newly generated sequences from four ribosomal and fourprotein-coding gene loci, we tested a series of a priori andnew evolutionary hypotheses regarding the relationshipsof trapelioid clades within Ostropomycetidae. We foundstrong support for a monophyletic group of nine coretrapelioid genera but no statistical support to reject thelong-standing hypothesis that trapelioid genera are sisterto Baeomycetaceae or Hymeneliaceae. However, we canreject a sister group relationship to Ostropales with highconfidence. Our data also shed light on several longstandingquestions, recovering Anamylopsoraceae nestedwithin Baeomycetaceae, elucidating two major monophyleticgroups within trapelioids (recognized here asTrapeliaceae and Xylographaceae), and rejecting themonophyly of the genus Rimularia. We transfer elevenspecies of the latter genus to Lambiella and describe thegenus Parainoa to accommodate a previously misunderstoodspecies of Trapeliopsis. Past phylogenetic studies inOstropomycetidae have invoked Bdivergence order^ fordrawing taxonomic conclusions on higher level taxa.Our data show that if backbone support is lacking, contrastingsolutions may be recovered with different oradded data. We accordingly urge caution in concludingevolutionary relationships from unresolved phylogenies.

  • 9.
    Westberg, Martin
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Millanes, Ana M.
    Universidad Rey Juan Carlos, Madrid.
    Knudsen, Kerry
    Czech University of Life Sciences.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Phylogeny of the Acarosporaceae (Lecanoromycetes, Ascomycota, Fungi) and the evolution of carbonized ascomata2015In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 73, p. 145-158Article in journal (Refereed)
    Abstract [en]

    The phylogeny of the Acarosporaceae (Lecanoromycetes, Acarosporomycetidae, Acarosporales) is investigated using data from three molecular markers; nuclear ITS-LSU rDNA, mitochondrial SSU and β-tubulin. Acarosporaceae is shown to be constituted by six main clades; Myriospora, Timdalia, Pleopsidium, a clade composed by Acarospora rhizobola and A. terricola, the poorly supported Sarcogyne clade (including several Polysporina and Acarospora species) and the Acarospora clade (including the type of Polysporina, P. simplex, and several other Polysporina species). The common ancestor of the Acarosporaceae did not produce strongly black pigmented (carbonized or melanized) ascomata, but this trait has arisen secondarily and independently numerous times in the evolution of the group. The number of changes in character states of both carbonized epihymenium and carbonized exciple are considerably more than the minimum number. The genera Sarcogyne and Polysporina—largely circumscribed based on the presence of black pigmented ascomata—are shown to be distinctly non-monophyletic. The presence of green algae in the ascoma margin (lecanorine or lecideine ascomata) may vary even within single species.

  • 10. Wijayawardande, N.N.
    et al.
    Prieto, Maria
    Swedish Museum of Natural History, Department of Botany.
    Olariaga, Ibai
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Notes for genera – Ascomycota2017In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 86, p. 1-594Article in journal (Refereed)
1 - 10 of 10
CiteExportLink to result list
Permanent link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf