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  • 1. Aptroot, André
    et al.
    Stapper, Norbert J.
    Košuthová, Alica
    Swedish Museum of Natural History, Department of Botany.
    van Herk, KCM
    Lichens as an indicator of climate and global change2021In: Climate change: observed impact on planet Earth / [ed] Letcher, T., Elsevier, 2021, p. 483-497Chapter in book (Refereed)
  • 2.
    Cannon, P.
    et al.
    y, Royal Botanic Gardens, Kew, UK.
    Aptroot, A.
    ABL Herbarium, Netherlands.
    Coppins, B.
    Royal Botanic Garden, Edinburgh, UK.
    Simkin, J.
    Newcastle University, UK.
    Otálora, M.
    ETH Zürich, Switzerland.
    Košuthová, Alica
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Revisions of British and Irish Lichens vol. 3 - Peltigerales: Collemataceae (including the genera Blennothallia, Callome, Collema, Enchylium, Epiphloea, Lathagrium, Leptogium, Pseudoleptogium, Rostania and Scytinium.2020Other (Refereed)
    Abstract [en]

    Revisions of British and Irish Lichens is a free-to-access serial publication under the auspices of the British Lichen Society, that charts changes in our understanding of the lichens and lichenicolous fungi of Great Britain and Ireland. Each volume will be devoted to a particular family (or group of families), and will include descriptions, keys, habitat and distribution data for all the species included. The maps are based on information from the BLS Lichen Database, that also includes data from the historical Mapping Scheme and the Lichen Ireland database. The choice of subject for each volume will depend on the extent of changes in classification for the families concerned, and the number of newly recognized species since previous treatments. To date, accounts of lichens from our region have been published in book form. However, the time taken to compile new printed editions of the entire lichen biota of Britain and Ireland is extensive, and many parts are out-of-date even as they are published. Issuing updates as a serial electronic publication means that important changes in understanding of our lichens can be made available with a shorter delay. The accounts may also be compiled at intervals into complete printed accounts, as new editions of the Lichens of Great Britain and Ireland.

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  • 3.
    Dítě, Daniel
    et al.
    Slovak Academy of Science, Slovakia.
    Hájek, Michal
    Masaryk University in Brno, Czech republic.
    Svitková, Ivana
    Slovak Academy of Science.
    Alica, Košuthová
    Swedish Museum of Natural History, Department of Botany.
    Šoltés, Rudolf
    Institute of High Mountains Biology, Slovakia.
    Kliment, Ján
    Botanical Garden of Comenius University, Slovakia.
    Glacial-relict symptoms in the Western Carpathian flora2018In: Folia Geobotanica, ISSN 1211-9520, E-ISSN 1874-9348, Vol. 53, p. 277-300, article id 10.1007/s12224-018-9321-8Article in journal (Refereed)
    Abstract [en]

    Glacial relicts have been regionally morecommon in glacial than in recent times. A rigorousassessment of which species are indeed glacial relictsis extremely difficult because direct evidence is untraceableor equivocal for many species.We aimed to identifyspecies of theWestern Carpathian flora (vascular plants,bryophytes and terrestrial lichens) that display apparentbiogeographical and ecological symptoms, suggesting awider regional or supra-regional distribution during glacialtimes, or at least before the middle-Holoceneclimate optimum. We worked with the premise thatexemplary relict species should tolerate continentaland/or arctic climates, should have large distributionranges with disjunctions, being regionally rare and ecologicallyconservative nowadays, should be associatedwith habitats that occurred during glacial times (tundra,steppe, peatland, open coniferous forest) and shoulddisplay a restriction of ecological niches in the studyregion. The assessed species were primarily those withboreo-continental or artcic-alpine distribution.We demonstrateda conspicuous gradient of glacial-relict symptoms,with Carex vaginata, Betula nana, Trichophorumpumilum, Nephroma arcticum, Saxifraga hirculus andCladonia stellaris topping the ranking. Based on thearbitrary ranking, 289 taxa can be considered highprobabilityrelicts. For only a minority of them, thereare any phylogeographical and/or palaeoecological dataavailable from the study area. Biogeographical and ecologicalsymptoms of 144 taxa suggest that they retreatedrapidly after the Last Glacial Maximum whereas otherspecies probably retreated later. The first principal componentof biogeographical symptoms sorted speciesfrom circumpolar arctic-alpine species of acidicpeatlands and wet tundra to strongly continental speciesof steppe, steppe-tundra and mineral-rich fens. Thisdifferentiation may mirror the altitudinal zonation ofglacial vegetation in the Western Carpathians.

  • 4. Hurtado, P
    et al.
    Prieto, Maria
    Kosuthova, Alica
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Contrasting environmental drivers determine biodiversity patterns in epiphytic lichen communities along a European latitudinal gradient.2020In: Microorganisms, E-ISSN 2076-2607, Vol. 8, article id 1913Article in journal (Refereed)
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  • 5. Hurtado, P
    et al.
    Prieto, Maria
    Kosuthova, Alica
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Disentangling functional trait variation and covariation in epiphytic lichens along a continent-wide latitudinal gradient.2020In: Proceedings of the Royal Society of London. Biological Sciences, ISSN 0962-8452, E-ISSN 1471-2954, Vol. 287, article id 20192862Article in journal (Refereed)
  • 6. Jiroušek, Martin
    et al.
    Peterka, Tomáš
    Chytrý, Milan
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic.
    Jiménez‐Alfaro, Borja
    Research Unit of Biodiversity (UO/CSIC/PA) Oviedo University Mieres Spain.
    Kuznetsov, Oleg L.
    Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, Petrozavodsk, Karelia, Russia.
    Pérez‐Haase, Aaron
    Department of Biosciences, University of Vic - Central University of Catalonia, Vic, Spain6Department of Evolutionary Biology, Ecology and Environmental Sciences, University of Barcelona, Barcelona, Spain.
    Aunina, Liene
    Laboratory of Geobotany Institute of Biology University of Latvia Riga Latvia.
    Biurrun, Idoia
    Department of Plant Biology and Ecology University of the Basque Country UPV/EHU Bilbao Spain.
    Dítě, Daniel
    Institute of Botany, Plant Science and Biodiversity Center Slovak Academy of Sciences Bratislava Slovakia.
    Goncharova, Nadezhda
    Institute of Biology, Komi Scientific Centre, Ural Branch, Russian Academy of Sciences, Syktyvkar, Komi Republic, Russia.
    Hájková, Petra
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic;Laboratory of Paleoecology Institute of Botany of the Czech Academy of Sciences Brno Czech Republic.
    Jansen, Florian
    Faculty of Agricultural and Environmental Sciences University of Rostock Rostock Germany.
    Koroleva, Natalia E.
    Avrorin Polar-Alpine Botanical Garden-Institute, Kola Science Center, Russian Academy of Sciences, Apatity, Murmansk Region, Russi.
    Lapshina, Elena D.
    Yugra State University, Khanty-Mansiysk, Russia.
    Lavrinenko, Igor A.
    Laboratory of Dynamics of the Arctic Vegetation Cover, Komarov Botanical Institute, Russian Academy of Sciences, St. Petersburg, Russia.
    Lavrinenko, Olga V.
    Laboratory of Dynamics of the Arctic Vegetation Cover, Komarov Botanical Institute, Russian Academy of Sciences, St. Petersburg, Russia.
    Napreenko, Maxim G.
    Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia17Immanuel Kant Baltic Federal University, Kaliningrad, Russia.
    Pawlikowski, Pawel
    Department of Plant Ecology and Environmental Conservation, Institute of Environmental Biology, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland.
    Rašomavičius, Valerijus
    Institute of Botany, Nature Research Centre, Vilnius, Lithuania.
    Rodwell, John S.
    Independent Consultant Lancaster UK.
    Romero Pedreira, David
    Department of Biology Faculty of Science University of A Coruña A Coruña Spain.
    Sahuquillo Balbuena, Elvira
    Department of Biology Faculty of Science University of A Coruña A Coruña Spain.
    Smagin, Viktor A.
    Laboratory of General Geobotany, Komarov Botanical Institute, Russian Academy of Sciences, St. Petersburg, Russia.
    Tahvanainen, Teemu
    Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland.
    Biţă‐Nicolae, Claudia
    Institute of Biology Bucharest, Romanian Academy, Bucharest, Romania.
    Felbaba‐Klushyna, Lyubov
    Department of Botany Faculty of Biology Uzhhorod National University Uzhhorod Ukraine.
    Graf, Ulrich
    Biodiversity and Conservation Biology Research Unit Swiss Federal Institute for Forest, Snow and Landscape Research WSL Birmensdorf Switzerland.
    Ivchenko, Tatiana G.
    Laboratory of General Geobotany, Komarov Botanical Institute, Russian Academy of Sciences, St. Petersburg, Russia; Group of Ecology of Living Organisms, Tobolsk Complex Scientific Station of Ural Branch of the Russian Academy of Sciences, Tobolsk, Russia.
    Jandt, Ute
    Institute of Biology/Geobotany and Botanical Garden Martin Luther University Halle‐Wittenberg Halle Germany;<idGroup xmlns="http://www.wiley.com/namespaces/wiley"> <id type="ringgold" value="530625"></id> </idGroup> German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Leipzig Germany.
    Jiroušková, Jana
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic;Laboratory of Paleoecology Institute of Botany of the Czech Academy of Sciences Brno Czech Republic.
    Košuthová, Alica
    Swedish Museum of Natural History, Department of Botany. Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic; Department of Botany Swedish Museum of Natural History Stockholm Sweden.
    Lenoir, Jonathan
    <idGroup xmlns="http://www.wiley.com/namespaces/wiley"> <id type="ringgold" value="26993"></id> </idGroup> UMR CNRS 7058 “Ecologie et Dynamique des Systèmes Anthropisés” (EDYSAN) Université de Picardie Jules Verne Amiens France.
    Onyshchenko, Viktor
    M. G. Kholodny Institute of Botany National Academy of Sciences of Ukraine Kyiv Ukraine.
    Plášek, Vítězslav
    <idGroup xmlns="http://www.wiley.com/namespaces/wiley"> <id type="ringgold" value="49576"></id> </idGroup> Department of Biology and Ecology University of Ostrava Ostrava Czech Republic;Institute of Biology University of Opole Opole Poland.
    Plesková, Zuzana
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic.
    Shirokikh, Pavel S.
    <idGroup xmlns="http://www.wiley.com/namespaces/wiley"> <id type="ringgold" value="54744"></id> </idGroup> Ufa Institute of Biology Ufa Federal Scientific Centre Russian Academy of Sciences Ufa Republic of Bashkortostan Russia.
    Šímová, Anna
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic.
    Šmerdová, Eva
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic.
    Tokarev, Pavel N.
    <idGroup xmlns="http://www.wiley.com/namespaces/wiley"> <id type="ringgold" value="54744"></id> </idGroup> Institute of Biology Karelian Research Centre Russian Academy of Sciences Petrozavodsk Karelia Russia.
    Hájek, Michal
    Department of Botany and Zoology Faculty of Science Masaryk University Brno Czech Republic.
    Classification of European bog vegetation of the Oxycocco‐Sphagnetea class2022In: Applied Vegetation Science, ISSN 1402-2001, E-ISSN 1654-109X, Vol. 25, no 1, p. 1-19Article in journal (Refereed)
    Abstract [en]

    Aims: Classification of  European bog   vegetation (Oxycocco- Sphagnetea class);    iden  -tification of  diagnostic species for   the   class    and   vegetation subgroups (orders and alliances); development of  an  expert     system for   automatic classification of  vegetation plots; and production of distribution maps of the Oxycocco- Sphagnetea class and its alliances.Location: Europe.Methods: A  data   set   of  vegetation- plot   records was   compiled to  include various bog types    over    most    of  the   European continent. An   unsupervised classification (beta- flexible linkage    method, Sørensen distance measure) and  detrended correspondenceanalysis (DCA)    ordination were    applied. Formal definitions of  syntaxa based    on  spe -cies  presence  and  covers,  and  respecting  the  results  of  the  unsupervised  classifica-tion, were developed and included in a classification expert system.Results: The Oxycocco- Sphagnetea class,    its  two   orders (Sphagno- Ericetalia  tetralicisand Sphagnetalia medii)  and   seven    compositionally distinct alliances were    formally de -fined.    In  addition to  the   syntaxa included in  EuroVegChecklist, three    new    alliances were distinguished: Rubo chamaemori- Dicranion elongati (subarctic polygon and   palsa mires);    Erico mackaianae- Sphagnion papillosi (blanket bogs   of  the  northwestern IberianPeninsula); and  Sphagno  baltici- Trichophorion  cespitosi (boreal bog   lawns). The   latter alliance is newly described in this article.Conclusions: This   first   pan-   European formalized classification of  European bog   veg -etation partially followed the   system presented in  EuroVegChecklist, but   suggested three  additional  alliances.  One  covers  palsa  and  polygon  mires,  one  covers  Iberian  bogs    with    endemics and   one   fills   the   syntaxonomical gap   for   lawn    microhabitats in boreal    bogs.    A  classification expert     system has   been   developed, which    allows    assign   -ment of vegetation plots to the types described.

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  • 7.
    Kosuthova, Alica
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Westberg, Martin
    Swedish Museum of Natural History, Department of Botany.
    Otálora, Monica A.G.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Rostania revisited – testing generic delimitations in Collemataceae (Peltigerales, Lecanoromycetes)2019In: MycoKeys, ISSN 1314-4057, E-ISSN 1314-4049, Vol. 47, p. 17-33Article in journal (Refereed)
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  • 8.
    Kosuthova, Alica
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Westberg, Martin
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    A revision of the Rostania occultata (Collemataceae) complex in Fennoscandia2022In: The Lichenologist, ISSN 0024-2829, E-ISSN 1096-1135, Vol. 54, no 1, p. 13-24Article in journal (Refereed)
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  • 9.
    Košuthová, Alica
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Bergsten, Johannes
    Swedish Museum of Natural History, Department of Zoology.
    Westberg, Martin
    Uppsala University, Sweden.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Species delimitation in the cyanolichen genus Rostania2020In: BMC Evolutionary Biology, E-ISSN 1471-2148, Vol. 115Article in journal (Refereed)
    Abstract [en]

    Background

    In this study, we investigate species limits in the cyanobacterial lichen genus Rostania (Collemataceae, Peltigerales, Lecanoromycetes). Four molecular markers (mtSSU rDNA, β-tubulin, MCM7, RPB2) were sequenced and analysed with two coalescent-based species delimitation methods: the Generalized Mixed Yule Coalescent model (GMYC) and a Bayesian species delimitation method (BPP) using a multispecies coalescence model (MSC), the latter with or without an a priori defined guide tree.

    Results

    Species delimitation analyses indicate the presence of eight strongly supported candidate species. Conclusive correlation between morphological/ecological characters and genetic delimitation could be found for six of these. Of the two additional candidate species, one is represented by a single sterile specimen and the other currently lacks morphological or ecological supporting evidence.

    Conclusions

    We conclude that Rostania includes a minimum of six species: R. ceraniscaR. multipunctataR. occultata 1, R. occultata 2, R. occultata 3, and R. occultata 4,5,6. Three distinct Nostoc morphotypes occur in Rostania, and there is substantial correlation between these morphotypes and Rostania thallus morphology.

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  • 10.
    Steinová, Jana
    et al.
    Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, 128 01 Prague, Czech Republic.
    Holien, Håkon
    Košuthová, Alica
    Swedish Museum of Natural History, Department of Botany.
    Škaloud, Pavel
    An Exception to the Rule? Could Photobiont Identity Be a Better Predictor of Lichen Phenotype than Mycobiont Identity?2022In: Journal of Fungi, E-ISSN 2309-608X, Vol. 8, no 3, p. 275-275Article in journal (Refereed)
    Abstract [en]

    With rare exceptions, the shape and appearance of lichen thalli are determined by thefungal partner; thus, mycobiont identity is normally used for lichen identification. However, it hasrepeatedly been shown in recent decades that phenotypic data often does not correspond with fungalgene evolution. Here, we report such a case in a three-species complex of red-fruited Cladonia lichens,two of which clearly differ morphologically, chemically, ecologically and in distribution range. Weanalysed 64 specimens of C. bellidiflora, C. polydactyla and C. umbricola, mainly collected in Europe,using five variable mycobiont-specific and two photobiont-specific molecular markers. All mycobiontmarkers exhibited very low variability and failed to separate the species. In comparison, photobiontidentity corresponded better with lichen phenotype and separated esorediate C. bellidiflora from thetwo sorediate taxa. These results can be interpreted either as an unusual case of lichen photomorphsor as an example of recent speciation, in which phenotypic differentiation precedes the separation ofthe molecular markers. We hypothesise that association with different photobionts, which is probablyrelated to habitat differentiation, may have triggered speciation in the mycobiont species. 

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  • 11.
    Westberg, Martin
    et al.
    Swedish Museum of Natural History, Department of Botany.
    Kosuthova, Alica
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Skorpgelélav och dess släktingar i Sverige – en art som blev fyra2022In: Lavbulletinen, ISSN 1651-6435, p. 22-30Article in journal (Other (popular science, discussion, etc.))
  • 12. Widhelm, Todd J.
    et al.
    Grewe, Felix
    Goffinet, Bernard
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Goward, Trevor
    Coca, Luis F.
    Distefano, Isabel
    Kosuthova, Alica
    Swedish Museum of Natural History, Department of Botany.
    Lumbsch, H. Thorsten
    Phylogenomic reconstruction addressing the Peltigeralean backbone (Lecanoromycetes, Ascomycota)2021In: Fungal diversity, ISSN 1560-2745, E-ISSN 1878-9129, Vol. 110, no 1, p. 59-73Article in journal (Refereed)
  • 13. Zamora, J.C.
    et al.
    Hansen, Karen
    Swedish Museum of Natural History, Department of Botany.
    Kosuthova, Alica
    Prieto, Maria
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Considerations and consequences of allowing DNA sequence data as types of fungal taxa2018In: IMA Fungus, ISSN 2210-6340, E-ISSN 2210-6359, Vol. 9, p. 167-175Article in journal (Refereed)
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