Publications
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
X-ray µ-CT data reconstruction, image stack of sample NRM M8681 [dataset].
University of Bremen .
University of Bremen .
Burke Museum of Natural History and Culture, University of Washington, Seattle.
Swedish Museum of Natural History, Department of Paleobiology. Department of Palaeobiology Swedish Museum of Natural History Stockholm Sweden;Bolin Centre for Climate Research Stockholm University Stockholm Sweden.ORCID iD: 0000-0001-6281-100X
2025 (English)Other (Other academic)
Resource type
Three dimensional object
Physical description [en]

This contribution comprises a true-3D volume dataset (Digital rock sample) of a fossilized whale ear bone material from Oligocene strata in Washington State, USA, acquired by a X-ray Computed Microtomography (µ-CT) survey.

Images Downloadable from https://doi.pangaea.de/10.1594/PANGAEA.984306

Abstract [en]

This contribution comprises a true-3D volume dataset (Digital rock sample) of a fossilized whale ear bone material from Oligocene strata in Washington State, USA, acquired by a X-ray Computed Microtomography (µ-CT) survey (Kiel et al., submitted). The specimen is curated in the paleontological collection of the Swedish Museum of Natural History, Stockholm, Sweden. The X-ray μ-CT scan was performed using the CT-ALPHA system of the MAPEX Center for Materials and Processes at the University of Bremen, Germany. The reconstructed image material has a resolution of 46.8 µm/voxel.Sample NRM M8681 shows bioerosion traces typical of Osedax on its surface and contains an ear bone of a whale (Mysticeti, genus and species undetermined). The piece was found as float, Canyon River, Lincoln Creek Formation, probably late Oligocene (could be from older strata farther upstream and downsection), Grays Harbor County, Washington.The µ-CT-derived image volume comprises the true 3-D spatial arrangement of the fabric compounds in the rock. In the reconstructed 16-bit greyscale volume data, areas of highly attenuating phases (e.g., calcite) are encoded in light grey values, whereas areas of lower X-ray absorption are color-coded in darker grey (e.g. sediment) or black (e.g. voids, cracks). In order to facilitate straightforward access to the digital image material, the volume data is provided as a zipped stack of tif images. In addition, the digital rock sample is characterized by three types of visualization: (i) shaded and classical texture-based volume rendering (volren), (ii) maximum intensity projection (volren-MIP): visualization of the highest intensity in the data volume along the current line of sight, and (iii) three perpendicular virtual cutting planes (3-slices).As an added value to the non-destructive visualization procedure, the reconstructed X-ray micro-CT scan of the studied rock material represents a volume reconstruction which may be studied as digital facsimile (e. g., for investigations regarding morphometric analyses of bioerosion traces) without the necessity of consultation / modification / destructive handling of the actual specimen.

Place, publisher, year, pages
PANGAEA , 2025. , p. 1
Keywords [en]
CT scan, 3D images, Oligocene, Whale ear bone
National Category
Palaeontology and Palaeoecology
Research subject
The changing Earth
Identifiers
URN: urn:nbn:se:nrm:diva-6315OAI: oai:DiVA.org:nrm-6315DiVA, id: diva2:2025774
Available from: 2026-01-07 Created: 2026-01-07 Last updated: 2026-01-07Bibliographically approved

Open Access in DiVA

fulltext(56 kB)13 downloads
File information
File name FULLTEXT01.pdfFile size 56 kBChecksum SHA-512
f5462601a73b753fd388ebcfed01ddd910470dc7aacbd2530cef877b25902dda68ee80dfad9124ebc9c4811f40a4a49c456166891e994f0c2e840984aef525ed
Type fulltextMimetype application/pdf

Search in DiVA

By author/editor
Kiel, Steffen
By organisation
Department of Paleobiology
Palaeontology and Palaeoecology

Search outside of DiVA

GoogleGoogle Scholar
The number of downloads is the sum of all downloads of full texts. It may include eg previous versions that are now no longer available

urn-nbn

Altmetric score

urn-nbn
Total: 141 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf