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  • 551. Zhao, X
    et al.
    Fernández-Brime, Samantha
    Swedish Museum of Natural History, Department of Botany.
    Wedin, Mats
    Swedish Museum of Natural History, Department of Botany.
    Locke, M
    Leavitt, S.D.
    Lumbsch, H. Thorsten
    Using multi-locus sequence data for addressing species boundaries in commonly accepted lichen-forming fungal species.2017In: Organisms Diversity & Evolution, ISSN 1439-6092, E-ISSN 1618-1077, Vol. 17, p. 351-363Article in journal (Refereed)
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  • 552. Zimmermann, Judith
    et al.
    Wentrup, Cecilia
    Sadowski, Miriam
    Blazejak, Anna
    Gruber-Vodicka, Harald R.
    Kleiner, Manuel
    Ott, Jörg A.
    Cronholm, Bodil
    Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
    De Wit, Pierre
    Erseus, Christer
    Dubilier, Nicole
    Closely coupled evolutionary history of ecto- and endosymbionts from two distantly related animal phyla2016In: Molecular Ecology, ISSN 0962-1083, E-ISSN 1365-294X, Vol. 25, no 13, p. 3203-3223Article in journal (Refereed)
  • 553. Zuccon, Dario
    et al.
    Cibois, Alice
    Pasquet, Eric
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    Nuclear and mitochondrial sequence data reveal the major lineages of starlings, mynas and related taxa.2006In: Molecular Phylogenetics and Evolution, ISSN 1055-7903, E-ISSN 1095-9513, Vol. 41, no 2, p. 333-44Article in journal (Refereed)
    Abstract [en]

    We investigated the phylogenetic relationships among the major lineages of the avian family Sturnidae and their placement within the Muscicapoidea clade using two nuclear (RAG-1 and myoglobin) and one mitochondrial gene (ND2). Among Muscicapoidea, we recovered three clades corresponding to the families Cinclidae, Muscicapidae and Sturnidae (sensu [Sibley, C.G., Monroe Jr., B.L., 1990. Distribution and Taxonomy of Birds of the World. Yale University Press, New Haven, CT]). Within the sturnoid lineage Mimini and Sturnini are sister groups, with Buphagus basal to them. We identified three major lineages of starlings: the Philippine endemic genus Rhabdornis, an Oriental-Australasian clade (genera Scissirostrum, Gracula, Mino, Ampeliceps, Sarcops, Aplonis), and an Afrotropical-Palaearctic clade (all African taxa, Sturnus and Acridotheres). We discuss the biogeographic implications of our findings and suggest an Asiatic origin for this family. The congruence between the age of major clades, estimated by NPRS, and palaeoclimatic data present evidence for the role of climatic changes in shaping present day distribution of the group.

  • 554.
    Zuccon, Dario
    et al.
    Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    A multi-gene phylogeny disentangles the chat-flycatcher complex (Aves: Muscicapidae)2010In: Zoologica Scripta, ISSN 0300-3256, E-ISSN 1463-6409, Vol. 39, no 3, p. 213-224Article in journal (Refereed)
  • 555. Zuccon, Dario
    et al.
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    Molecular and morphological evidences place the extinct New Zealand endemic Turnagra capensis in the Oriolidae.2012In: Molecular Phylogenetics and Evolution, ISSN 1055-7903, E-ISSN 1095-9513, Vol. 62, no 1, p. 414-26Article in journal (Refereed)
    Abstract [en]

    The affinities of Piopio Turnagra capensis, an extinct New Zealand passerine, remain poorly known. It has been included into or associated with several bird families (Calleatidae, Cracticidae, Pachycephalidae, Ptilonorhynchidae, Turdidae), often on tenuous grounds. We reassessed Turnagra phylogenetic relationships using nuclear and mitochondrial sequences and a set of morphological and behavioural traits. Molecular and phenotypic characters strongly suggest a novel hypothesis, congruently placing Turnagra in Oriolidae, a highly dispersive corvoid family distributed from the Austro-Papuan landmass to Eurasia and Africa, but missing from the Pacific islands. We show also that the published molecular support to link Turnagra with Ptilonorhynchidae was biased by the use of incorrect genetic data and weak analyses.

  • 556. Zuccon, Dario
    et al.
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    The Monticola rock-thrushes: phylogeny and biogeography revisited.2010In: Molecular Phylogenetics and Evolution, ISSN 1055-7903, E-ISSN 1095-9513, Vol. 55, no 3, p. 901-10Article in journal (Refereed)
    Abstract [en]

    We investigated the phylogenetic relationships within the Monticola rock-thrushes, an open-habitat genus inhabiting a large part of the Old World. Our results support one Oriental clade and one clade including African, Malagasy and Eurasian taxa. The biogeographic reconstruction obtained with the dispersal-vicariance analysis suggested Southern Africa plus Palearctic as the Monticola ancestral area. Our phylogenetic hypothesis suggests also some taxonomic changes. The polytypic Monticola solitarius includes two reciprocally monophyletic clades that should be recognized as full species, M. solitarius s.s. and M. philippensis. With the exclusion of the south-western population, M. imerinus, all other Malagasy rock-thrush populations should be merged in the monotypic, albeit polymorphic, M. sharpei. The genus Thamnolaea is shown to be non-monophyletic, with T. semirufa being part of the Monticola radiation, while T. cinnamomeiventris is related to other chat species inhabiting open-habitats. We demonstrate that a previous phylogenetic hypothesis for the rock-thrushes was flawed by the inclusion of contaminated sequences obtained from study-skins and we suggest some working guidelines to improve the reliability of the sequences obtained from old or degraded DNA.

  • 557.
    Zuccon, Dario
    et al.
    Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    The phylogenetic position of the Black-collared Bulbul Neolestes torquatus2010In: Ibis, ISSN 0019-1019, E-ISSN 1474-919X, Vol. 152, no 2, p. 386-392Article in journal (Refereed)
  • 558.
    Zuccon, Dario
    et al.
    Swedish Museum of Natural History, Department of Bioinformatics and Genetics.
    Pasquet, Eric
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    Phylogenetic relationships among Palearctic-Oriental starlings and mynas (genera Sturnus and Acridotheres: Sturnidae)2008In: Zoologica Scripta, ISSN 0300-3256, E-ISSN 1463-6409, Vol. 37, no 5, p. 469-481Article in journal (Refereed)
  • 559. Zuccon, Dario
    et al.
    Prŷs-Jones, Robert
    Rasmussen, Pamela C
    Ericson, Per G P
    Swedish Museum of Natural History, Research Division.
    The phylogenetic relationships and generic limits of finches (Fringillidae).2012In: Molecular Phylogenetics and Evolution, ISSN 1055-7903, E-ISSN 1095-9513, Vol. 62, no 2, p. 581-96Article in journal (Refereed)
    Abstract [en]

    Phylogenetic relationships among the true finches (Fringillidae) have been confounded by the recurrence of similar plumage patterns and use of similar feeding niches. Using a dense taxon sampling and a combination of nuclear and mitochondrial sequences we reconstructed a well resolved and strongly supported phylogenetic hypothesis for this family. We identified three well supported, subfamily level clades: the Holoarctic genus Fringilla (subfamly Fringillinae), the Neotropical Euphonia and Chlorophonia (subfamily Euphoniinae), and the more widespread subfamily Carduelinae for the remaining taxa. Although usually separated in a different family-group taxon (Drepanidinae), the Hawaiian honeycreepers are deeply nested within the Carduelinae and sister to a group of Asian Carpodacus. Other new relationships recovered by this analysis include the placement of the extinct Chaunoproctus ferreorostris as sister to some Asian Carpodacus, a clade combining greenfinches (Carduelis chloris and allies), Rhodospiza and Rhynchostruthus, and a well-supported clade with the aberrant Callacanthis and Pyrrhoplectes together with Carpodacus rubescens. Although part of the large Carduelis-Serinus complex, the poorly known Serinus estherae forms a distinct lineage without close relatives. The traditionally delimited genera Carduelis, Serinus, Carpodacus, Pinicola and Euphonia are polyphyletic or paraphyletic. Based on our results we propose a revised generic classification of finches and describe a new monotypic genus for Carpodacus rubescens.

9101112 551 - 559 of 559
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